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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.2 (Release date: Fri Feb 5 17:50:07 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.256 C 0.244 G 0.244 T 0.256 

MOTIF 1-GATAAGAGAC STREME-1
letter-probability matrix: alength= 4 w= 10 nsites= 138 P= 2.7e-002
 0.028300 0.009480 0.915105 0.047116
 0.790850 0.056431 0.105603 0.047116
 0.000075 0.094153 0.035487 0.870285
 0.807334 0.056520 0.065928 0.070217
 0.868068 0.056520 0.056520 0.018891
 0.090610 0.065928 0.796346 0.047116
 0.727304 0.079134 0.174671 0.018891
 0.151052 0.163807 0.589253 0.095889
 0.538143 0.141327 0.167902 0.152629
 0.101713 0.576792 0.168569 0.152927

MOTIF 2-TGCAAACAGA STREME-2
letter-probability matrix: alength= 4 w= 10 nsites= 126 P= 6.1e-002
 0.093815 0.020398 0.040719 0.845068
 0.135134 0.033981 0.797129 0.033756
 0.061044 0.792240 0.111843 0.034873
 0.814832 0.071201 0.020573 0.093394
 0.863260 0.040894 0.030559 0.065287
 0.794302 0.093774 0.040719 0.071205
 0.091526 0.734742 0.081361 0.092371
 0.786394 0.091522 0.071201 0.050884
 0.071283 0.117070 0.614838 0.196809
 0.598078 0.162820 0.096773 0.142328

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Stopped because 2 consecutive motifs exceeded the p-value threshold (0.001).
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COMMAND:	streme -p common/Klf1-200.fa -oc results/streme9 -objfun cd -minw 6 -maxw 10 -pvt 0.001 -patience 2 -dna -nref 5 -verbosity 1
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CPU:		Timothys-Mac-Mini.local
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FINALTIME:	0.88 seconds
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