# DOMAINATRIX Applications

The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

### Applications in the current domainatrix release

Program name | Description
--- | ---
cathparse | Generate DCF file from raw CATH files
domainnr | Remove redundant domains from a DCF file
domainreso | Remove low resolution domains from a DCF file
domainseqs | Add sequence records to a DCF file
domainsse | Add secondary structure records to a DCF file
scopparse | Generate DCF file from raw SCOP files
ssematch | Search a DCF file for secondary structure matches