# cb2Bib Bookmarks and Network Query Info File
#
###########
# BOOKMARKS
###########
bookmark=PubMed Citation Finder|http://www.ncbi.nlm.nih.gov/entrez/query/static/citmatch.html
bookmark=HighWire Press -- Search|http://highwire.stanford.edu/cgi/search/
bookmark=DBLP Bibliography|http://www.informatik.uni-trier.de/~ley/db/indices/query.html
bookmark=arXiv.org e-Print archive|http://arxiv.org/
bookmark=CiteSeer.IST|http://citeseer.ist.psu.edu/cs
bookmark=Directory of Open Access Journals|http://www.doaj.org/home
bookmark=PLoS - The Public Library of Science|http://www.plos.org/
bookmark=Scirus|http://www.scirus.com/srsapp/advanced/index.jsp
bookmark=Search ACS Publications|http://pubs.acs.org/journals/query/subscriberSearch.jsp
bookmark=Google Scholar|http://scholar.google.com/
bookmark= |
bookmark=Web Search for current 'Title'|http://www.google.com/search?q=<<title>>
bookmark=Current 'Journal-Volume-Page' to DOI|http://www.crossref.org/guestquery/?search_type=journal&auth=&issn=&title=<<journal>>&art_title=&volume=<<volume>>&issue=<<number>>&page=<<pages>>&year=<<year>>&isbn=&comp_num=&series_title=&multi_hit=on&view_records=Search
bookmark=Article Contents by current 'DOI'|http://dx.doi.org/<<doi>>
# CR subscribers might consider its bookmark as:
# bookmark=Current 'Journal-Volume-Page' to DOI|http://doi.crossref.org/resolve?pid=<USR>:<PWD>&aulast=&title=<<journal>>&volume=<<volume>>&issue=&page=<<pages>>&year=&isbn=&comp_num=&series_title=
# See http://www.crossref.org/02publishers/25query_spec.html#Anchor-OpenUR-43032


#####################
# Network Query Info:
#####################
#
# Queries are performed in 4 steps:
# 1)  Post Query( journal-fullname, volume, first page ) (HTML post + cb2Bib tags)
# 2)  Capture referenceurl and pdfurl from query (RegExp)
# 3)  Retrieve referenceurl = referenceurl_prefix + capture_from_query + referenceurl_sufix
# 4)  Retrieve pdfurl = pdfurl_prefix + capture_from_query + pdfurl_sufix
#
#
# Submition Form -- All required, ordered as here, no comment or blank lines in between
# QUERY INFO FOR
#journal=cb2Bib Long Journal Name|journal code
#query=  (use '<<post>>http://www...' for http post method, instead of get method)
#capture_from_query=
#referenceurl_prefix=
#referenceurl_sufix=
#pdfurl_prefix=
#pdfurl_sufix=
#action=  (blank or 'browse_referenceurl' or 'browse_query')



# QUERY INFO FOR IJQC
# No BibTeX reference available. Instead, set 'action=browse_referenceurl'.
# Reference and PDF file can later be extracted from browser, by selecting it.
journal=International Journal of Quantum Chemistry|
query=http://www3.interscience.wiley.com/search/allsearch?mode=citation&contextLink=%3Ca+href%3D%22%2Findex.html%22+target%3D%22_top%22%3EHome%3C%2Fa%3E+%2F+%3Ca+href%3D%22%2Fcgi-bin%2Fbrowsebysubject%3Fcode%3DCHEM%22+target%3D%22_top%22%3EChemistry%3C%2Fa%3E+%2F+%3Ca+href%3D%22%2Fcgi-bin%2Fbrowsebycategory%3Fcode%3DCH65%22+target%3D%22_top%22%3EComputational+Chemistry+and+Molecular+Modeling%3C%2Fa%3E&issn=1097-461X&volume=<<volume>>&issue=&pages=<<pages>>
capture_from_query=/cgi-bin/abstract/(\d+)/ABSTRACT
referenceurl_prefix=http://www3.interscience.wiley.com/cgi-bin/abstract/
referenceurl_sufix=/ABSTRACT
pdfurl_prefix=
pdfurl_sufix=
action=browse_referenceurl

# QUERY INFO FOR PNAS
# Extracts BibTeX reference and article PDF file
journal=Proceedings of the National Academy of Sciences|
query=http://www.pnas.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://www\.pnas\.org/cgi/reprint/([/\d\w]+)\?
referenceurl_prefix=http://www.pnas.org/cgi/citmgr?type=bibtex&gca=pnas;
referenceurl_sufix=
pdfurl_prefix=http://www.pnas.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR NAR
# Extracts BibTeX reference and article PDF file
journal=Nucleic Acids Research|
query=http://nar.oxfordjournals.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://nar\.oxfordjournals\.org/cgi/content/abstract/([/\d\w]+)\?
referenceurl_prefix=http://nar.oxfordjournals.org/cgi/citmgr_bibtex?gca=nar;
referenceurl_sufix=
pdfurl_prefix=http://nar.oxfordjournals.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR SCIENCE
# Extracts BibTeX reference and article PDF file
journal=Science|
query=http://www.sciencemag.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://www\.sciencemag\.org/cgi/reprint/([/\d\w]+)\?
referenceurl_prefix=http://www.sciencemag.org/cgi/citmgr_bibtex?gca=sci;
referenceurl_sufix=
pdfurl_prefix=http://www.sciencemag.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR BJ
# Extracts BibTeX reference and article PDF file
journal=Biophysical Journal|
query=http://www.biophysj.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://www\.biophysj\.org/cgi/reprint/([/\d\w]+)\?
referenceurl_prefix=http://www.biophysj.org/cgi/citmgr_bibtex?gca=biophysj;
referenceurl_sufix=
pdfurl_prefix=http://www.biophysj.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR PS
# Extracts BibTeX reference and article PDF file
journal=Protein Science|
query=http://www.proteinscience.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://www\.proteinscience\.org/cgi/reprint/([/\d\w]+)\?
referenceurl_prefix=http://www.proteinscience.org/cgi/citmgr_bibtex?gca=protsci;
referenceurl_sufix=
pdfurl_prefix=http://www.proteinscience.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR B
# Extracts BibTeX reference and article PDF file
journal=Bioinformatics|
query=http://www.bioinformatics.oupjournals.org/cgi/search?sendit=Search&pubdate_year=&volume=<<volume>>&firstpage=<<pages>>&DOI=&author1=&author2=&title=&andorexacttitle=and&titleabstract=&andorexacttitleabs=and&fulltext=&andorexactfulltext=and&fmonth=Jan&fyear=1990&tocsectionid=all&RESULTFORMAT=1&hits=10&hitsbrief=25&sortspec=relevance&sortspecbrief=relevance
capture_from_query=http://bioinformatics\.oupjournals\.org/cgi/reprint/([/\d\w]+)\?
referenceurl_prefix=http://bioinformatics.oupjournals.org/cgi/citmgr_bibtex?gca=bioinfo;
referenceurl_sufix=
pdfurl_prefix=http://bioinformatics.oupjournals.org/cgi/reprint/
pdfurl_sufix=.pdf
action=

# QUERY INFO FOR ACS
# No BibTeX reference available. Instead, set 'action=browse_referenceurl'.
# Reference and PDF file can later be extracted from browser, by selecting it.
journal=Accounts of Chemical Research|achre4
journal=Analytical Chemistry|ancham
journal=Analytical Chemistry A-Pages|anchama
journal=Biochemistry|bichaw
journal=Bioconjugate Chemistry|bcches
journal=Biomacromolecules|bomaf6
journal=Biotechnology Progress|bipret
journal=Chemical Research in Toxicology|crtoec
journal=Chemical Reviews|chreay
journal=Chemistry of Materials|cmatex
journal=Crystal Growth and Design|cgdefu
journal=Energy and Fuels|enfuem
journal=Environmental Science and Technology A-Pages|esthaga
journal=Environmental Science and Technology|esthag
journal=Industrial and Engineering Chemistry|iechad
journal=Industrial and Engineering Chemistry Research Fundamentals|iecfa7
journal=Industrial and Engineering Chemistry Research|iecred
journal=Inorganic Chemistry|inocaj
journal=Journal of Agricultural and Food Chemistry|jafcau
journal=Journal of Chemical and Engineering Data|jceaax
journal=Journal of Chemical Information and Computer Sciences|jcisd8
journal=Journal of Chemical Information and Modeling|jcisd8
journal=Journal of Chemical Theory and Computation|jctcce
journal=Journal of Combinatorial Chemistry|jcchff
journal=Journal of Medicinal Chemistry|jmcmar
journal=Journal of Natural Products|jnprdf
journal=Journal of Organic Chemistry|joceah
journal=Journal of Physical Chemistry A|jpcafh
journal=Journal of Physical Chemistry B|jpcbfk
journal=Journal of Physical Chemistry|jpchax
journal=Journal of Proteome Research|jprobs
journal=Journal of the American Chemical Society|jacsat
journal=Langmuir|langd5
journal=Macromolecules|mamobx
journal=Molecular Pharmaceutics|mpohbp
journal=Nano Letters|nalefd
journal=Organic Letters|orlef7
journal=Organic Process Research and Development|oprdfk
journal=Organometallics|orgnd7
query=http://pubs.acs.org/journals/query/subscriberResults.jsp?Research=true&yearrange1=ASAP&yearrange3=current&cit_qjrn=<<journal>>&spn=<<pages>>&vol=<<volume>>&styear=YYYY&endyear=YYYY
capture_from_query=/cgi-bin/searchRedirect\.cgi/<<journal>>/(.+)"
referenceurl_prefix=http://pubs.acs.org/cgi-bin/searchRedirect.cgi/<<journal>>/
referenceurl_sufix=
pdfurl_prefix=
pdfurl_sufix=
action=browse_referenceurl

# QUERY INFO FOR JCP, JAP and JMP
# Extracts BibTeX reference
# kfmclient required ('query=' returns a redirection)
journal=The Journal of Chemical Physics|JCP
journal=Journal of Chemical Physics|JCP
journal=Journal of Applied Physics|JAP
journal=Journal of Mathematical Physics|JMP
query=http://link.aip.org/link/?<<journal>>/<<volume>>/<<pages>>
capture_from_query="SelectCheck" value="([\w\d]+)"
referenceurl_prefix=http://scitation.aip.org/getabs/servlet/GetCitation?fn=view_bibtex2&source=scitation&PrefType=ARTICLE&PrefAction=Add+Selected&SelectCheck=
referenceurl_sufix=&downloadcitation=+Go+
pdfurl_prefix=http://scitation.aip.org/getpdf/servlet/GetPDFServlet?filetype=pdf&id=
pdfurl_sufix=&idtype=cvips
action=

# QUERY INFO FOR PubMed, SPECIAL CASES (PubMed doesn't know full journal name)
# Extracts Medline reference
journal=Proteins: Structure, Function, and Bioinformatics|Proteins
journal=Proteins: Structure, Function, and Genetics|Proteins
query=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?orig_db=PubMed&db=PubMed&cmd=Search&defaultField=Title+Word&term=<<journal>>[jour]+AND+<<volume>>+[volume]+AND+<<pages>>[page]
capture_from_query=list_uids=(\d+)&
referenceurl_prefix=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=MEDLINE&list_uids=
referenceurl_sufix=
pdfurl_prefix=
pdfurl_sufix=
action=

# QUERY INFO FOR PubMed
# Extracts Medline reference
# Blank journal meaning 'any journal name'
journal=
query=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?orig_db=PubMed&db=PubMed&cmd=Search&defaultField=Title+Word&term=<<journal>>[jour]+AND+<<volume>>+[volume]+AND+<<pages>>[page]
capture_from_query=list_uids=(\d+)&
referenceurl_prefix=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=MEDLINE&list_uids=
referenceurl_sufix=
pdfurl_prefix=
pdfurl_sufix=
action=

# QUERY INFO FOR CR
# Uses <<POST>> http method
journal=
query=<<post>>http://www.crossref.org/guestquery?search_type=journal&auth=&issn=&title=<<journal>>&volume=<<volume>>&issue=&page=<<pages>>&year=&isbn=&comp_num=&series_title=&multi_hit=on&view_records=Search
capture_from_query=http://dx\.doi\.org/([^>]+)>
referenceurl_prefix=http://dx.doi.org/
referenceurl_sufix=
pdfurl_prefix=
pdfurl_sufix=
action=browse_referenceurl

